PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv9_205910_kzzy.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 344aa    MW: 38515.9 Da    PI: 4.6448
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv9_205910_kzzy.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.7e-10164207755
                         HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         + Er+RR r+++++  Lr l+P+      +K++Ka+i+  Av Y+++Lq
  Bv9_205910_kzzy.t1 164 ISERKRRGRMKEKLYALRALVPNI-----TKMDKASIVGDAVLYVQDLQ 207
                         67*********************7.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.805157206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-15159224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.40E-11159209No hitNo description
SuperFamilySSF474593.27E-15159225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-12163212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-8164207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MDDSNSSANA TPSIPLITDF NLDFVEQNSL NFNHVIEMLR GSEISDPSAI CINQNFDPLA  60
FTRNNVSDNY SINNFYPIIS QENHVFNNFN SPTMSCTNNN TILNSSVSGF DDETIRGGGG  120
DEDDDNDDDD DNYMDGEHSS ATTNNKGSCT SSKKGKMDRS RTLISERKRR GRMKEKLYAL  180
RALVPNITKM DKASIVGDAV LYVQDLQMQS KKLRSQIDGL ENSLIAAERC QGFGDTPNKN  240
SSQNHFLPVC KMIMQMDVLQ IEDREFYAKV VSNKGQGVAA SLYKALDSLT TFVIRNSSLS  300
TLYEQFVLTF TLNVAKCRED FNLPNMKVWI SGAFLNQGFE FQSF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010689160.10.0PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
SwissprotQ0V7X49e-78FIT_ARATH; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
TrEMBLA0A0J8BMA80.0A0A0J8BMA8_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-73FER-like regulator of iron uptake